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Germplasm Resources at PeanutBase

Germplasm search | Genotype data | Pedigree chart | Phenotype data | Geographic Distribution | Germplasm Images & catalogs |

Search for germplasm data maintained at PeanutBase

Genotype data

Peanut Core Collection Genotype Phenotype Project: Characterizing The USDA Peanut Core Collection Through Genotype And Phenotype Information.
Genotype data for peanut (African Breeding Lines and U.S. Mini-core). See instructions for filtering data and managing outputs.
Genotype Comparison using GCViT: Compare genotypes using the diversity data from aradu1_araip1.gnm1.div.HK28.sub10k.vcf
GCViT or Genotype Comparison Visualization Tool: This tool is for whole genome visualization of resequencing or SNP array data. GCViT allows a user to compare two or more accessions and visually identify regions of similarity and difference across the genome. It is capable of multiple chromosome visualisation for the comparison of multiple accessions from a single dataset. It extracts information from VCF file and does a parallel comparison between two or more lines within that VCF file plotting the location of these differences on the chromosome for visualization. One can, for example, plot the differences between progeny and its parents to identify which regions are inherited from which parents. (More information and a video tutorial about GCViT is at GitHub and SoyBase)

Phenotype data:

Explore the peanut mini core phenotype data.

Pedigree chart:

Interactive pedigree chart from 'Use of Plant Introductions in Peanut Cultivar Development.' 2001. T G Isleib, C C Holbrook, D W Gorbet"

Geographic Distribution of Arachis Germplasm:

Locate germplasm accessions for Arachis species on an interactive map.
The Arachis germplasm accessions can be located on a map using a Geographical Information System (GIS) utility. You can search the distribution of germplasm accessions in a given geographic area, can map multiple species or restrict it to a single legume taxon, look at the accession details and evaluation data if available, and overlay trait evaluation data on the map.

Arachis Germplasm Image Collection

Contributor: Noelle Anglin, USDA-ARS, Griffin, Georgia (now at International Potato Center (CIP) - CGIAR) Video about project

Seed images | Pod images | Plant images | Catalogs
Seed images:

  1. Seed images. 2012 regeneration by Tom Isleib in North Carolina
  2. Seed images. 2011 regeneration by Noelle Barkley and Roy Pittman in Attalpulgus, GA
  3. Seed images. 2011 regeneration by Kim Moore in Brownfield, TX
  4. Seed images. 2011 regeneration by Barry Tillman's group in Florida.
  5. Seed images. 2012 regeneration by Barry Tillman's group in Griffin, GA
  6. Seed images. ICRISAT minicore collection. 2012 regeneration by Corley Holbrook in Tifton
  7. Seed images. Incoming lines from India, 2012
  8. Seed images. 2012 regeneration by Tom Isleib in North Carolina
  9. Seed images. Long-term stored seed for 2013 regeneration
  10. Seed images. Long-term stored seed for 2014 regeneration. Regeneration in Stillwater, OK by Kelly Chamberlin's group
  11. Seed images. Long-term stored seed for 2013 regeneration. Regeneration in Griffin, GA by Barry Tillman and Noelle Barkley
  12. Seed images. Long-term stored seed. Regeneration in Griffin, GA by Barry Tillman and Noelle Barkley
  13. Seed images. Long-term stored seed for 2012 regeneration. Regeneration in North Carolina by Tom Stalker's group
  14. Seed images. Minicore collection. 2012 regeneration by Charles Chen's group in FL
  15. Seed images. Various lines, Corley Holbrook, 2012
  16. Seed images. 2012 regeneration by Naveen Puppala's group in NM
  17. Seed images. 2012 regeneration by Kelly Chamberlin's group in Stillwater, OK
  18. Seed images. 2011 regeneration by Kelly Chamberlin's group in Stillwater, OK
  19. Seed images. U.S. standards, regenerated 2011, Tifton, GA
  20. Seed images. 2012 regeneration by Corley Holbrook's group in Tifton, GA
  21. Seed images. Greenhouse harvested 2011.
  22. Pod and seed images. 2012 regeneration by Tom Isleib in North Carolina

Pod images:

  1. Pod images. 2012 regeneration by Tom Isleib in North Carolina
  2. Pod images. 2011 regeneration by Noelle Barkley and Roy Pittman in Attalpulgus, GA
  3. Pod images. 2011 regeneration by Barry Tillman's group in Florida.
  4. Pod images. 2012 regeneration by Barry Tillman's group in Griffin, GA
  5. Pod images. ICRISAT minicore collection. 2012 regeneration by Corley Holbrook in Tifton
  6. Pod images. 2012 regeneration by Naveen Puppala's group in NM
  7. Pod images. U.S. standards, regenerated 2011, Tifton, GA
  8. Pod images. 2012 regeneration by Corley Holbrook's group in Tifton, GA

Plant images:

  1. Image of Krinkle mutant plant
  2. Flower images. Griffin, GA
  3. Flower images, various species, 2012
  4. Plot images. U.S. standards, regenerated 2011, Tifton, GA
  5. Various Arachis species. 2012 regeneration by Tom Stalker's group in North Carolina