MainStem_Leaves-Seedling_Leaves down-regulated
GeneName | baseMean | log2FoldChange | pvalue-adj | GBrowse | Sequence | Annotation |
Aradu.4YQ11 | 21.4 | -5.1 | 4.5e-03 | Aradu.4YQ11 | Aradu.4YQ11 | Eukaryotic aspartyl protease family protein; IPR001461 (Aspartic peptidase), IPR021109 (Aspartic peptidase domain); GO:0004190 (aspartic-type endopeptidase activity), GO:0006508 (proteolysis) |
Aradu.99LYU | 193.9 | -4.1 | 3.0e-04 | Aradu.99LYU | Aradu.99LYU | nicotianamine synthase 4; IPR004298 (Nicotianamine synthase); GO:0030410 (nicotianamine synthase activity), GO:0030418 (nicotianamine biosynthetic process) |
Aradu.EXV8Z | 55.3 | -4.1 | 2.8e-02 | Aradu.EXV8Z | Aradu.EXV8Z | Membrane transporter D1 n=3 Tax=Andropogoneae RepID=B6U4Q3_MAIZE; IPR005828 (General substrate transporter), IPR016196 (Major facilitator superfamily domain, general substrate transporter); GO:0016020 (membrane), GO:0016021 (integral component of membrane), GO:0022857 (transmembrane transporter activity), GO:0022891 (substrate-specific transmembrane transporter activity), GO:0055085 (transmembrane transport) |
Aradu.X4M49 | 29.9 | -4.2 | 7.8e-03 | Aradu.X4M49 | Aradu.X4M49 | sulfate transporter 3; 4; IPR001902 (Sulphate anion transporter); GO:0008271 (secondary active sulfate transmembrane transporter activity), GO:0008272 (sulfate transport), GO:0015116 (sulfate transmembrane transporter activity), GO:0016020 (membrane), GO:0016021 (integral component of membrane), GO:0055085 (transmembrane transport) |
Aradu.PJ3BC | 22.3 | -4.7 | 1.9e-03 | Aradu.PJ3BC | Aradu.PJ3BC | LOB domain-containing protein 25; IPR004883 (Lateral organ boundaries, LOB) |
Aradu.LEK83 | 85.9 | -3.3 | 3.2e-02 | Aradu.LEK83 | Aradu.LEK83 | uncharacterized protein LOC102667446 [Glycine max] |
Aradu.Y081X | 28.6 | -3.4 | 1.6e-02 | Aradu.Y081X | Aradu.Y081X | Oxalyl-CoA decarboxylase n=2 Tax=Mycobacterium RepID=U5WR06_MYCKA |
Aradu.35Z4P | 1100.5 | -2.8 | 3.3e-02 | Aradu.35Z4P | Aradu.35Z4P | proline dehydrogenase; IPR015659 (Proline oxidase); GO:0004657 (proline dehydrogenase activity), GO:0006537 (glutamate biosynthetic process), GO:0006562 (proline catabolic process), GO:0055114 (oxidation-reduction process) |
Aradu.62PY8 | 656.1 | -2.6 | 2.0e-03 | Aradu.62PY8 | Aradu.62PY8 | phosphoenolpyruvate carboxykinase 1; IPR001272 (Phosphoenolpyruvate carboxykinase, ATP-utilising); GO:0004611 (phosphoenolpyruvate carboxykinase activity), GO:0004612 (phosphoenolpyruvate carboxykinase (ATP) activity), GO:0005524 (ATP binding), GO:0006094 (gluconeogenesis), GO:0017076 (purine nucleotide binding) |
Aradu.NN7LE | 363.5 | -2.4 | 5.9e-04 | Aradu.NN7LE | Aradu.NN7LE | beta glucosidase 11; IPR001360 (Glycoside hydrolase, family 1), IPR017853 (Glycoside hydrolase, superfamily); GO:0005975 (carbohydrate metabolic process) |
Aradu.20AVJ | 235.8 | -2.8 | 7.3e-05 | Aradu.20AVJ | Aradu.20AVJ | copper/zinc superoxide dismutase 2; IPR001424 (Superoxide dismutase, copper/zinc binding domain); GO:0006801 (superoxide metabolic process), GO:0046872 (metal ion binding), GO:0055114 (oxidation-reduction process) |
Aradu.1X2PC | 234.4 | -2.4 | 1.4e-03 | Aradu.1X2PC | Aradu.1X2PC | component of high affinity nitrate transporter; IPR016605 (Transporter, high affinity nitrate, Nar2) |
Aradu.C2JFU | 224.7 | -2.4 | 7.9e-03 | Aradu.C2JFU | Aradu.C2JFU | Glucose-1-phosphate adenylyltransferase family protein; IPR011831 (Glucose-1-phosphate adenylyltransferase); GO:0005978 (glycogen biosynthetic process), GO:0008878 (glucose-1-phosphate adenylyltransferase activity), GO:0009058 (biosynthetic process), GO:0016779 (nucleotidyltransferase activity) |
Aradu.002J3 | 437.7 | -1.8 | 2.3e-03 | Aradu.002J3 | Aradu.002J3 | hypothetical protein |
Aradu.EM6Q0 | 381.6 | -1.9 | 4.9e-02 | Aradu.EM6Q0 | Aradu.EM6Q0 | metal-nicotianamine transporter YSL1-like isoform X2 [Glycine max]; IPR004813 (Oligopeptide transporter, OPT superfamily); GO:0055085 (transmembrane transport) |
Aradu.7Y3DJ | 263.3 | -1.8 | 1.7e-02 | Aradu.7Y3DJ | Aradu.7Y3DJ | glucan endo-1,3-beta-glucosidase 3-like [Glycine max]; IPR000490 (Glycoside hydrolase, family 17), IPR012946 (X8), IPR017853 (Glycoside hydrolase, superfamily); GO:0005975 (carbohydrate metabolic process) |
Aradu.V7BYP | 177.9 | -1.2 | 3.2e-04 | Aradu.V7BYP | Aradu.V7BYP | BHLH transcription factor; IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain); GO:0046983 (protein dimerization activity) |
Aradu.Z6PZ2 | 172.8 | -1.0 | 1.8e-02 | Aradu.Z6PZ2 | Aradu.Z6PZ2 | ureide permease 2; IPR009834 (Ureide permease) |
Aradu.53CQM | 143.5 | -1.8 | 4.3e-02 | Aradu.53CQM | Aradu.53CQM | zinc finger protein CONSTANS-LIKE 1-like [Glycine max]; IPR010402 (CCT domain); GO:0005515 (protein binding) |
Aradu.VXF1K | 142.2 | -1.0 | 5.0e-02 | Aradu.VXF1K | Aradu.VXF1K | translation initiation factor IF-1; IPR004368 (Translation initiation factor IF-1), IPR012340 (Nucleic acid-binding, OB-fold); GO:0003723 (RNA binding), GO:0003743 (translation initiation factor activity), GO:0006413 (translational initiation) |
Aradu.B2YUE | 119.2 | -1.1 | 3.2e-02 | Aradu.B2YUE | Aradu.B2YUE | F-box family protein; IPR001810 (F-box domain); GO:0005515 (protein binding) |
Aradu.SK7C1 | 96.6 | -1.5 | 4.7e-04 | Aradu.SK7C1 | Aradu.SK7C1 | selenium-binding protein 1; IPR008826 (Selenium-binding protein); GO:0005515 (protein binding), GO:0008430 (selenium binding) |
Aradu.N64BE | 88.6 | -1.9 | 2.5e-02 | Aradu.N64BE | Aradu.N64BE | UDP-Glycosyltransferase superfamily protein; IPR002213 (UDP-glucuronosyl/UDP-glucosyltransferase); GO:0008152 (metabolic process) |
Aradu.AMA0U | 86.6 | -1.0 | 4.1e-02 | Aradu.AMA0U | Aradu.AMA0U | LAG1 longevity assurance homolog 3; IPR016439 (Longevity assurance, LAG1/LAC1); GO:0016021 (integral component of membrane) |
Aradu.6UD07 | 42.7 | -1.9 | 4.7e-03 | Aradu.6UD07 | Aradu.6UD07 | gamma-tocopherol methyltransferase; IPR013216 (Methyltransferase type 11); GO:0008152 (metabolic process), GO:0008168 (methyltransferase activity) |
Aradu.543MU | 35.2 | -1.6 | 7.3e-05 | Aradu.543MU | Aradu.543MU | cytokinin oxidase/dehydrogenase 1; IPR016164 (FAD-linked oxidase-like, C-terminal), IPR016166 (FAD-binding, type 2), IPR016170 (Vanillyl-alcohol oxidase/Cytokinin dehydrogenase C-terminal domain); GO:0003824 (catalytic activity), GO:0008762 (UDP-N-acetylmuramate dehydrogenase activity), GO:0009690 (cytokinin metabolic process), GO:0016491 (oxidoreductase activity), GO:0019139 (cytokinin dehydrogenase activity), GO:0050660 (flavin adenine dinucleotide binding), GO:0055114 (oxidation-reduction process) |
Aradu.Z7F9J | 29.8 | -1.1 | 2.5e-02 | Aradu.Z7F9J | Aradu.Z7F9J | sulfate transporter 4; 2; IPR001902 (Sulphate anion transporter); GO:0008271 (secondary active sulfate transmembrane transporter activity), GO:0008272 (sulfate transport), GO:0015116 (sulfate transmembrane transporter activity), GO:0016020 (membrane), GO:0016021 (integral component of membrane), GO:0055085 (transmembrane transport) |
Aradu.F498Z | 21.4 | -1.5 | 4.9e-02 | Aradu.F498Z | Aradu.F498Z | Unknown protein |
Aradu.S3GXY | 508.6 | -1.0 | 2.6e-02 | Aradu.S3GXY | Aradu.S3GXY | cationic amino acid transporter 2; IPR002293 (Amino acid/polyamine transporter I); GO:0003333 (amino acid transmembrane transport), GO:0015171 (amino acid transmembrane transporter activity), GO:0016020 (membrane) |
Aradu.8K5HG | 343.3 | -0.8 | 3.2e-02 | Aradu.8K5HG | Aradu.8K5HG | Heavy metal cation transport atpase, putative n=1 Tax=Ricinus communis RepID=B9SG08_RICCO; IPR001757 (Cation-transporting P-type ATPase), IPR023214 (HAD-like domain), IPR023298 (P-type ATPase, transmembrane domain); GO:0000166 (nucleotide binding), GO:0006812 (cation transport), GO:0016021 (integral component of membrane), GO:0019829 (cation-transporting ATPase activity), GO:0046872 (metal ion binding) |
Aradu.7K1LW | 324.6 | -0.7 | 2.6e-02 | Aradu.7K1LW | Aradu.7K1LW | autophagy-related protein 18a-like [Glycine max]; IPR015943 (WD40/YVTN repeat-like-containing domain); GO:0005515 (protein binding) |
Aradu.QS6B9 | 320.5 | -0.8 | 3.5e-02 | Aradu.QS6B9 | Aradu.QS6B9 | ubiquitin-conjugating enzyme 16; IPR016135 (Ubiquitin-conjugating enzyme/RWD-like); GO:0016881 (acid-amino acid ligase activity) |
Aradu.8E85U | 212.4 | -0.8 | 4.3e-02 | Aradu.8E85U | Aradu.8E85U | Electron transporter/thiol-disulfide exchange intermediate protein n=1 Tax=Arachis hypogaea RepID=B4UW61_ARAHY; IPR012336 (Thioredoxin-like fold); GO:0009055 (electron carrier activity), GO:0015035 (protein disulfide oxidoreductase activity), GO:0045454 (cell redox homeostasis) |
Aradu.IF8ID | 118.8 | -0.9 | 1.9e-02 | Aradu.IF8ID | Aradu.IF8ID | uncharacterized protein At1g04910-like isoform X2 [Glycine max]; IPR019378 (GDP-fucose protein O-fucosyltransferase) |
Araip.9KU8R | 41.9 | -5.6 | 3.1e-02 | Araip.9KU8R | Araip.9KU8R | Cytochrome P450 superfamily protein; IPR001128 (Cytochrome P450); GO:0005506 (iron ion binding), GO:0020037 (heme binding), GO:0055114 (oxidation-reduction process) |
Araip.ZJ9GZ | 37.1 | -5.0 | 2.0e-03 | Araip.ZJ9GZ | Araip.ZJ9GZ | flowering locus protein T; IPR008914 (Phosphatidylethanolamine-binding protein PEBP) |
Araip.T84RU | 33.8 | -5.8 | 3.1e-02 | Araip.T84RU | Araip.T84RU | Gibberellin-regulated family protein; IPR003854 (Gibberellin regulated protein) |
Araip.HP7FW | 67.1 | -4.7 | 3.3e-02 | Araip.HP7FW | Araip.HP7FW | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages. |
Araip.CQA3P | 55.1 | -4.3 | 1.4e-02 | Araip.CQA3P | Araip.CQA3P | Membrane transporter D1 n=3 Tax=Andropogoneae RepID=B6U4Q3_MAIZE; IPR005828 (General substrate transporter), IPR016196 (Major facilitator superfamily domain, general substrate transporter); GO:0016020 (membrane), GO:0016021 (integral component of membrane), GO:0022857 (transmembrane transporter activity), GO:0022891 (substrate-specific transmembrane transporter activity), GO:0055085 (transmembrane transport) |
Araip.RJ07Z | 974.5 | -3.2 | 1.9e-03 | Araip.RJ07Z | Araip.RJ07Z | ferritin 4; IPR001519 (Ferritin), IPR008331 (Ferritin/DPS protein domain), IPR009078 (Ferritin-like superfamily); GO:0006826 (iron ion transport), GO:0006879 (cellular iron ion homeostasis), GO:0008199 (ferric iron binding) |
Araip.9P3Y0 | 483.0 | -3.2 | 3.7e-02 | Araip.9P3Y0 | Araip.9P3Y0 | Cytochrome P450 superfamily protein; IPR001128 (Cytochrome P450); GO:0005506 (iron ion binding), GO:0020037 (heme binding), GO:0055114 (oxidation-reduction process) |
Araip.J68AX | 105.2 | -3.7 | 2.6e-02 | Araip.J68AX | Araip.J68AX | Integral membrane protein n=1 Tax=Beta vulgaris RepID=Q39416_BETVU; IPR005828 (General substrate transporter), IPR016196 (Major facilitator superfamily domain, general substrate transporter); GO:0016020 (membrane), GO:0016021 (integral component of membrane), GO:0022857 (transmembrane transporter activity), GO:0022891 (substrate-specific transmembrane transporter activity), GO:0055085 (transmembrane transport) |
Araip.SJI2G | 29.3 | -3.8 | 1.8e-02 | Araip.SJI2G | Araip.SJI2G | sucrose transporter 4; IPR005989 (Sucrose/H+ symporter, plant); GO:0005887 (integral component of plasma membrane), GO:0008515 (sucrose transmembrane transporter activity), GO:0015770 (sucrose transport) |
Araip.P2G6L | 27.6 | -3.8 | 3.6e-02 | Araip.P2G6L | Araip.P2G6L | Protein kinase superfamily protein; IPR000014 (PAS domain), IPR001610 (PAC motif), IPR011009 (Protein kinase-like domain); GO:0004672 (protein kinase activity), GO:0004871 (signal transducer activity), GO:0005524 (ATP binding), GO:0006468 (protein phosphorylation), GO:0007165 (signal transduction) |
Araip.0J9BI | 408.7 | -2.6 | 4.7e-04 | Araip.0J9BI | Araip.0J9BI | copper/zinc superoxide dismutase 2; IPR001424 (Superoxide dismutase, copper/zinc binding domain); GO:0006801 (superoxide metabolic process), GO:0046872 (metal ion binding), GO:0055114 (oxidation-reduction process) |
Araip.EK7KI | 164.7 | -2.4 | 6.8e-03 | Araip.EK7KI | Araip.EK7KI | protein POLLEN DEFECTIVE IN GUIDANCE 1-like isoform X2 [Glycine max]; IPR008010 (Membrane protein,Tapt1/CMV receptor) |
Araip.L7859 | 135.9 | -2.4 | 3.3e-02 | Araip.L7859 | Araip.L7859 | receptor-like protein kinase 4; IPR001611 (Leucine-rich repeat), IPR003591 (Leucine-rich repeat, typical subtype), IPR011009 (Protein kinase-like domain), IPR013210 (Leucine-rich repeat-containing N-terminal, type 2), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup); GO:0004672 (protein kinase activity), GO:0005515 (protein binding), GO:0005524 (ATP binding), GO:0006468 (protein phosphorylation) |
Araip.8GU9K | 29.9 | -2.5 | 3.1e-02 | Araip.8GU9K | Araip.8GU9K | LOB domain-containing protein 4; IPR004883 (Lateral organ boundaries, LOB) |
Araip.Z4SZJ | 29.9 | -2.5 | 2.6e-02 | Araip.Z4SZJ | Araip.Z4SZJ | Flavin-binding monooxygenase family protein; IPR013027 (FAD-dependent pyridine nucleotide-disulphide oxidoreductase), IPR020946 (Flavin monooxygenase-like); GO:0016491 (oxidoreductase activity), GO:0050660 (flavin adenine dinucleotide binding), GO:0050661 (NADP binding), GO:0055114 (oxidation-reduction process) |
Araip.A6M6K | 4072.6 | -1.2 | 2.6e-02 | Araip.A6M6K | Araip.A6M6K | ascorbate peroxidase 1; IPR010255 (Haem peroxidase); GO:0004601 (peroxidase activity), GO:0006979 (response to oxidative stress), GO:0020037 (heme binding), GO:0055114 (oxidation-reduction process) |
Araip.6K53R | 2336.3 | -1.3 | 4.3e-02 | Araip.6K53R | Araip.6K53R | UDP-D-glucuronate 4-epimerase 6; IPR001509 (NAD-dependent epimerase/dehydratase), IPR008089 (Nucleotide sugar epimerase); GO:0003824 (catalytic activity), GO:0005975 (carbohydrate metabolic process), GO:0044237 (cellular metabolic process), GO:0050662 (coenzyme binding) |
Araip.HIE89 | 1076.8 | -2.0 | 4.2e-02 | Araip.HIE89 | Araip.HIE89 | Glucose-1-phosphate adenylyltransferase family protein; IPR011831 (Glucose-1-phosphate adenylyltransferase); GO:0005978 (glycogen biosynthetic process), GO:0008878 (glucose-1-phosphate adenylyltransferase activity), GO:0009058 (biosynthetic process), GO:0016779 (nucleotidyltransferase activity) |
Araip.CE8M2 | 421.0 | -1.7 | 7.3e-05 | Araip.CE8M2 | Araip.CE8M2 | selenium-binding protein 2; IPR008826 (Selenium-binding protein); GO:0008430 (selenium binding) |
Araip.8IP1M | 338.8 | -2.0 | 2.6e-02 | Araip.8IP1M | Araip.8IP1M | ubiquitin-conjugating enzyme 23; IPR016135 (Ubiquitin-conjugating enzyme/RWD-like); GO:0016881 (acid-amino acid ligase activity) |
Araip.FD6UL | 299.0 | -1.3 | 2.8e-02 | Araip.FD6UL | Araip.FD6UL | cytochrome C oxidase subunit 5b; IPR002124 (Cytochrome c oxidase, subunit Vb); GO:0004129 (cytochrome-c oxidase activity), GO:0005740 (mitochondrial envelope) |
Araip.D1WUI | 264.4 | -1.2 | 3.8e-02 | Araip.D1WUI | Araip.D1WUI | telomere repeat-binding protein 3-like isoform X2 [Glycine max]; IPR002877 (Ribosomal RNA methyltransferase FtsJ domain), IPR009057 (Homeodomain-like); GO:0003677 (DNA binding), GO:0003682 (chromatin binding), GO:0008168 (methyltransferase activity), GO:0032259 (methylation) |
Araip.PBT3B | 146.9 | -1.3 | 3.3e-02 | Araip.PBT3B | Araip.PBT3B | glucan endo-1,3-beta-glucosidase 3-like [Glycine max]; IPR000490 (Glycoside hydrolase, family 17), IPR012946 (X8), IPR017853 (Glycoside hydrolase, superfamily); GO:0005975 (carbohydrate metabolic process) |
Araip.YK0HJ | 126.7 | -1.5 | 3.1e-02 | Araip.YK0HJ | Araip.YK0HJ | uncharacterized protein LOC100796420 isoform X1 [Glycine max] |
Araip.0W21P | 108.6 | -1.5 | 3.2e-02 | Araip.0W21P | Araip.0W21P | receptor-like protein kinase 2; IPR003591 (Leucine-rich repeat, typical subtype), IPR011009 (Protein kinase-like domain), IPR013210 (Leucine-rich repeat-containing N-terminal, type 2), IPR013320 (Concanavalin A-like lectin/glucanase, subgroup); GO:0004672 (protein kinase activity), GO:0005524 (ATP binding), GO:0006468 (protein phosphorylation) |
Araip.MGZ89 | 73.1 | -2.0 | 2.1e-02 | Araip.MGZ89 | Araip.MGZ89 | hypothetical protein |
Araip.4L18R | 50.6 | -1.6 | 3.2e-02 | Araip.4L18R | Araip.4L18R | Cu/Zn-superoxide dismutase copper chaperone; IPR001424 (Superoxide dismutase, copper/zinc binding domain), IPR006121 (Heavy metal-associated domain, HMA); GO:0006801 (superoxide metabolic process), GO:0030001 (metal ion transport), GO:0046872 (metal ion binding), GO:0055114 (oxidation-reduction process) |
Araip.13HZD | 438.2 | -0.7 | 5.0e-02 | Araip.13HZD | Araip.13HZD | structural constituent of cell wall protein, putative; IPR010820 (Protein of unknown function DUF1421) |
Araip.DY10M | 297.0 | -0.6 | 3.9e-02 | Araip.DY10M | Araip.DY10M | GTP-binding nuclear protein Ran-3-like [Glycine max]; IPR001806 (Small GTPase superfamily), IPR002041 (Ran GTPase), IPR005225 (Small GTP-binding protein domain), IPR024156 (Small GTPase superfamily, ARF type), IPR027417 (P-loop containing nucleoside triphosphate hydrolase); GO:0003924 (GTPase activity), GO:0005525 (GTP binding), GO:0005622 (intracellular), GO:0006184 (GTP catabolic process), GO:0006886 (intracellular protein transport), GO:0006913 (nucleocytoplasmic transport), GO:0007165 (signal transduction), GO:0007264 (small GTPase mediated signal transduction), GO:0015031 (protein transport), GO:0016020 (membrane) |
Araip.LKE7H | 260.8 | -0.9 | 1.7e-02 | Araip.LKE7H | Araip.LKE7H | Heavy metal cation transport atpase, putative n=1 Tax=Ricinus communis RepID=B9SG08_RICCO; IPR001757 (Cation-transporting P-type ATPase), IPR023214 (HAD-like domain); GO:0006812 (cation transport), GO:0016021 (integral component of membrane), GO:0019829 (cation-transporting ATPase activity) |
Araip.EFY6X | 75.8 | -0.9 | 8.4e-03 | Araip.EFY6X | Araip.EFY6X | SPX domain gene 4; IPR004331 (SPX, N-terminal) |